Protein Information

Protein ZmbZIP13
ZmbZIP13 is a protein in the bZIP family.
Information
TF Name:	ZmbZIP13
Species:	Maize
TF Family:	bZIP
Gene Name(Synonym):	BZIP13
Uniprot ID:	A0A1D6PDQ1
Subgenome:	1

ZmbZIP13 is a protein in the bZIP family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
	PF00170	PF07716
Zm00001eb253370_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Gene ID	Type	Sequence	FIMO	Position
Zm00001d017911	DAPseq	sequence	fimo	position
Zm00001d017911	DAPseq	sequence	fimo	position
Zm00001d017911	ChIPseq	sequence	fimo	position
Zm00001d017911	PChIPseq	sequence	fimo	position

Interactions where ZmbZIP13 is the regulator

There are no protein-dna interactions that fit this criteria.

Interactions where ZmbZIP13 is the target
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There are 77 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb253370_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MYPAAEIASVPYLSPAASFKPHYHVATDDDGGFLYQQYSNLLLPHPPSYYQEVAYDQLVLEASFPVGGNNRSNSESDEYQ
RSVAEERRKRRMVSNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHAIRDCDRVLRENSQLRDEQTKLQQQLE
MLPVDTTESGAMSPGS

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00170
PF07716
PF07716
PF00170
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Nucleotide Sequence
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GGACAGTCTCGATGGAGACAGTTTT...

GRMZM2G020799_T01 from maize genome v3

Related TFome: pUT4700

Amino Acid Sequence
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MYPAAEIASVPYLSPAASFKPHYHVATDDDGGFLYQQYSNLLLPHPPSYYQEVAYDQLVLEASFPVGGNNRSNSESDEYQ
RSVAEERRKRRMVSNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHAIRDCDRVLRENSQLRDEQTKLQQQLE
MLPVDTTESGAMSPGS

Nucleotide Sequence
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GTTTCAACGATGCAGGTGTGGGTCC...

Zm00001d017911_T001 from maize genome v4

Amino Acid Sequence
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MYPAAEIASVPYLSPAASFKPHYHVATDDDGGFLYQQYSNLLLPHPPSYYQEVAYDQLVLEASFPVGGNNRSNSESDEYQ
RSVAEERRKRRMVSNRESARRSRMRKQKQLSELWAQVVHLRSTNRQLLDQLNHAIRDCDRVLRENSQLRDEQTKLQQQLE
MLPVDTTESGAMSPGS

Nucleotide Sequence
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ATGTACCCTGCTGCTGAGATCGCTA...

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Protein ZmbZIP13

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmbZIP13 is the regulator

Interactions where ZmbZIP13 is the target
Expand

Zm00001eb253370_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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Expand

GRMZM2G020799_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d017911_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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